While the functions of the cytoplasmic fatty acid-binding proteins (FA
BPs) are not well defined, one possibility in neural tissue is in esta
blishing and maintaining the high levels of polyunsaturated fatty acid
s in membrane lipids characteristic of this tissue and thought essenti
al for normal function. We investigated the reactivity of a protein in
developing mouse brain to antiserum prepared against rat heart (H)-FA
BP. By immunoblot analysis, levels of H-FABP in brain were nearly unde
tectable until fetal day 17-19, after which levels increased until at
least postnatal day 14. Levels of H-FABP were lower in the adult mouse
brain, suggesting a function for the protein during differentiation o
f neural tissue. In immunohistochemical studies with postnatal day 14
mouse brain, the most intensely stained area was the choroid plexus. H
-FABP also localized to regions of the somatosensory cortex and to the
spinal trigeminal nucleus. In addition, H-FABP was present in the tha
lamus, entorhinal and piriform cortex, and throughout the pontine and
medullary nuclei. Tracts related to the auditory system, including ven
tral cochlear nucleus and lateral lemniscus, also were H-FABP-positive
. In cerebellum, the molecular layer was heavily labeled in cells and
processes; in the granule cell layer, there was punctate staining sugg
estive of messy fiber terminals. Small cells adjacent to Purkinje cell
s were intensely stained, while the Purkinje cells were negative. We c
onclude that H-FABP in brain participates in neurite formation and syn
apse maturation, and may be related to the similar pattern of expressi
on of GABA related markers.