During the course of this study a novel family of Chlamydomonas mobile
elements has been identified in natural isolate strain 224. The first
member of this class to be characterized, a 2.8-kb element named Pion
eer1, was trapped in an intron of the nitrate reductase structural gen
e, NIT1. This element has been cloned and completely sequenced and fou
nd to be unusual in structure. Pioneer elements are present in a very
low-copy number of three per genome in strain 224. The copy number inc
reased by one upon transposition of Pioneer1. Hybridization of Pioneer
1 to a variety of Chlamydomonas strains confirmed that this element di
ffered from previously described Chlamydomonas transposons. It also in
dicated that related elements are present in low-copy number in natura
l isolate strains 356 and S1D2, but not in the most commonly used labo
ratory strains 137c and 21 gr. For these reasons, members of the Pione
er family might prove useful as insertional mutagens.