Gene-preferential oligonucleotide probes were used to determined the r
elative abundance and half-lives of distinct oat phytochrome A (PHYA)
mRNAs. Oat PHYA mRNAs are highly conserved in the 5'-untranslated regi
on and the coding region, but the 3'-untranslated region has an overal
l lower sequence conservation and was the source of gene-preferential
probes. PHYA3 mRNA was estimated to be ca. 61% of the oat PHYA mRNA po
ol present in poly(A)(+) RNA from dark-grown seedlings. The half-lives
for PHYA3 and PHYA4 mRNAs were both estimated to be ca. 30 min, and a
similar short half-life was estimated for the average PHYA mRNA. Sequ
ence comparisons of PHYA mRNAs from four grass species identified cons
erved sequences within the 5'- and 3'-untranslated regions that might
be important for PHYA mRNA degradation.