Penclomedine (PEN) is a synthetic pyridine derivative that has been se
lected for clinical development based on its activity against human an
d mouse breast tumors implanted in mice. Its mechanism of action was u
nclear, and we were interested in determining its mechanism of cytotox
icity in vitro and in vivo. We found chromosome breaks, gaps, and exch
anges in P388 ascites cells from BD2F1 mice treated with 200 mg/kg PEN
. Maximal observed damage occurred 24 hr after drug administration. Al
kaline elution indicated only limited DNA strand breaks and interstran
d cross-linking; in vitro, PEN (75 mu g/mL) inhibited RNA and DNA synt
heses almost completely. In addition, incubation of [C-14]PEN with rat
liver S-9 fraction in the presence of calf thymus DNA resulted in the
stable transfer of radioactivity to DNA. Addition of butylated hydrox
ytoluene, a free radical scavenger, to the incubation mixture inhibite
d the binding of drug to DNA, implicating free radicals as the ultimat
e reactive species. These data suggest that PEN can be metabolized to
free radical, DNA-reactive products, and that its cytotoxicity is due
to chromosomal damage produced by monofunctional alkylation. As an alt
ernate mechanism, the ability of PEN to inhibit cellular dihydroorotat
e dehydrogenase was explored. Although PEN is an inhibitor of this enz
yme in cells in vivo, in vitro, and in isolated cell sonicates, HPLC a
nalyses of ribonucleotide triphosphate pools in P388 cells showed that
all triphosphates had increased, especially UTP. Addition of uridine
to the cell culture failed to prevent PEN-mediated cytotoxicity, sugge
sting that inhibition of de novo pyrimidine biosynthesis was not likel
y to be an important mechanism of action of this drug. These data sugg
est that PEN is activated in cells to a free radical that binds DNA.