We present molecular dynamics simulations of intermediate density diso
rdered alkane monolayer systems tethered to model silica surfaces. The
densities and chain lengths studied are typical of reversed phase liq
uid chromatography (RPLC) stationary phases. The simulations are used
to elucidate at the molecular level the complicated nature of the stru
cture and dynamics of the stationary phases, which may critically affe
ct the retention mechanisms of RPLC. We examine temperature, chain len
gth, chain density, and surface structure effects on the chain propert
ies. Also, we explore the driving forces responsible for observed inte
rfacial ordering of the chain system in relation to previous simulatio
ns and analytical theories. An attractive surface potential and an att
ractive interparticle potential are both necessary to obtain the struc
ture with the most realistic features. A corrugated surface perturbs t
he chain density profile relative to that on a flat surface but does n
ot appreciably affect the dynamics of the chains.