We report the complete DNA sequences of the protamine P1 gene and flan
king regions for 13 species of the marsupial family Dasyuridae. The st
ructure of the protamine locus is conserved in dasyurids and consists
of two exons (of lengths 142-151 and 47 bp) separated by an intron (20
8-240 bp), A key feature of the dasyurid intron is a 38-40 bp duplicat
ion found in all species examined to date, This duplication apparently
predates the radiation of modern dasyurid lineages and may be homolog
ous to a similar feature in the marsupial mole (Notoryctes). Sequences
from a species of Planigale demonstrate that this genus is unique amo
ng marsupials in possessing cysteine residues in its protamine Pl mole
cules. Cysteines may provide enhanced chemical stability for condensed
sperm nuclei, a physiological feature that would converge on the comm
on eutherian pattern. Phylogenetic analysis of the protamine genes yie
lds a tree that is largely congruent with previous molecular systemati
c studies in two areas: (1) There are three main dasyurid lineages cor
responding to the Sminthopsinae, Dasyurinae, and Phascogalinae; (2) Da
syurinae and Phascogalinae are sister groups, This study is the first
estimate of dasyurid relationships based on a nuclear DNA sequence.