Tk. Harris et Mw. Washabaugh, DISTRIBUTION OF THE THIAMIN DIPHOSPHATE C(2)-PROTON DURING CATALYSIS OF ACETALDEHYDE FORMATION BY BREWERS-YEAST PYRUVATE DECARBOXYLASE, Biochemistry, 34(43), 1995, pp. 13994-14000
The distribution of tritium derived from enzyme-bound [thiazole-2-T]th
iamin diphosphate (TDP) during the reaction of pyruvate to form acetal
dehyde catalyzed by pyruvate decarboxylase isozymes (PDC; EC 4.1.1.1)
from Saccharomyces carlsbergensis was determined under single-turnover
conditions ([E] > [S] > in the presence of the nonsubstrate allosteri
c effector pyruvamide. The specific radioactivity of the [1-L]acetalde
hyde product and solvent ([L]H2O) was 43 +/- 4% and 54 +/- 2%, respect
ively, of the initial specific radioactivity of PDC-bound [thiazole-2-
T]TDP and was independent of the extent of the single-turnover reactio
n. There is little (less than or equal to 3%) or no return of the abst
racted C(2)-hydron to the C(2) position of PDC-bound TDP. This provide
s evidence that the abstracted C(2)-hydron is involved in the specific
protonation of the C(cr) position of the PDC-bound intermediate 2-(1-
hydroxyethyl)thiamin diphosphate (HETDP), which is cleaved to form [1-
L]acetaldehyde and PDC-bound [thiazole-2-H]TDP. The partial exchange o
f C(2)-derived tritium into solvent requires that (1) hydron transfer
from C(2) occurs to a catalytic base in which the conjugate catalytic
acid is partially shielded from hydron exchange with the solvent, (2)
the conjugate catalytic acid transfers the C(2)-derived hydron to the
C(alpha) position of HETDP, and (3) hydron transfer to C(2) to regener
ate the coenzyme occurs either from solvent directly or from a second
catalytic acid of the enzyme that undergoes rapid hydron exchange with
the solvent. The observed rate constant k(obsd) = 1.4 min(-1) for C(2
)-hydron exchange in PDC-bound TDP in the absence of substrate corresp
onds to a pK(a) value for C(2)-H at the active site of 17.5.