NUCLEOTIDE-SEQUENCE OF A NUCLEOSIDE TRIPHOSPHATE PHOSPHOHYDROLASE GENE FROM AFRICAN SWINE FEVER VIRUS

Citation
Jmp. Freije et al., NUCLEOTIDE-SEQUENCE OF A NUCLEOSIDE TRIPHOSPHATE PHOSPHOHYDROLASE GENE FROM AFRICAN SWINE FEVER VIRUS, Virus research, 30(1), 1993, pp. 63-72
Citations number
39
Categorie Soggetti
Virology
Journal title
ISSN journal
01681702
Volume
30
Issue
1
Year of publication
1993
Pages
63 - 72
Database
ISI
SICI code
0168-1702(1993)30:1<63:NOANTP>2.0.ZU;2-V
Abstract
A putative nucleoside triphosphate phosphohydrolase (NTPase) gene of A frican swine fever virus was identified by using a degenerate oligonuc leotide probe derived from the nucleoside triphosphate binding motif, which is highly conserved among viral and cellular NTPases. The probe hybridized with fragments SalI E and EcoRI Q, which is entirely contai ned in the former one. Sequencing of this region revealed an open read ing frame, designated Q706L, coding for a protein of 706 amino acids, with a calculated molecular weight of 80,283. The deduced amino acid s equence of this open reading frame has significant similarity with the putative helicase encoded by the killer plasmid pGKL2 of Kluyveromyce s lactis as well as with the NTPase I of vaccinia virus and entomopoxv irus and a subunit of the early transcription factor of vaccinia and f owlpox virus. The protein encoded by this open reading frame contains the sequence features characteristic of helicases of the superfamily I I. According to this, we propose the inclusion of the product of this ASF virus gene in this superfamily.