The structure of the capsular polysaccharide of Escherichia coli K5 is
identical to that of N-acetyl-heparosan, a nonsulfated precursor of h
eparin, which makes this E. coli antigen an attractive starting point
for the chemical synthesis of analogs of low-molecular-weight heparin.
This polysaccharide is synthesized as a high-molecular-weight molecul
e that can be depolymerized by an enzyme displaying endo-beta-eliminas
e activity. The eliminase-encoding gene, designated elmA, has been clo
ned from E. coli K5 by expression in E. coli K-12. The K-12 genome is
devoid of the elmA sequence. The elmA gene product is 820 amino acids
long. Active recombinant eliminase is produced by K-12 cells in both c
ell-bound and secreted forms. Deletion analyses have shown that the C
terminus and the N terminus are required for activity and secretion, r
espectively.