R. Dewey et al., CLUSTERING OF ARGENTINEAN TOSPOVIRUSES WITH EXISTING SPECIES IN THE GENUS BY SEQUENCE-ANALYSIS OF A 450-NUCLEOTIDE RNA REGION OF THE N GENE, Virus genes, 13(3), 1996, pp. 255-262
The genomic diversity of Argentine Tospoviruses from different geograp
hical areas, and from several distinct crops was analysed here. For ea
ch isolate, RT-PCR, cloning and sequencing of a 450 nt fragment of the
N gene were performed. Comparisons of RNA and predicted amino acid se
quence identity and similarity were made. A partial sequence of the N
gene was able to classify our local isolates within three Tospovirus s
pecies previously described (Tomato spotted wilt virus, TSWV; tomato c
hlorotic spot virus, TCSV and groundnut ringspot virus, GRSV). With th
e sequence data currently available, we performed a cladistic phylogen
etic analysis which gave a possible genealogy among members of the Tos
povirus genus.