REVISED TAXONOMY OF THE METHANOTROPHS - DESCRIPTION OF METHYLOBACTER GEN-NOV, EMENDATION OF METHYLOCOCCUS, VALIDATION OF METHYLOSINUS AND METHYLOCYSTIS SPECIES, AND A PROPOSAL THAT THE FAMILY METHYLOCOCCACEAE INCLUDES ONLY THE GROUP-I METHANOTROPHS
Jp. Bowman et al., REVISED TAXONOMY OF THE METHANOTROPHS - DESCRIPTION OF METHYLOBACTER GEN-NOV, EMENDATION OF METHYLOCOCCUS, VALIDATION OF METHYLOSINUS AND METHYLOCYSTIS SPECIES, AND A PROPOSAL THAT THE FAMILY METHYLOCOCCACEAE INCLUDES ONLY THE GROUP-I METHANOTROPHS, International journal of systematic bacteriology, 43(4), 1993, pp. 735-753
Numerical taxonomic, DNA-DNA hybridization, and phospholipid fatty aci
d composition analyses were performed on an extensive range of methano
trophic strains, including reference strains and environmental isolate
s obtained from sites throughout eastern Australia. When the results o
f these studies were related to the results of a study based on genomi
c physicochemical properties, they clarified group I and II methanotro
ph genus and species interrelationships. The group I methanotrophs wer
e found to be made up of three broadly phenotypically and genotypicall
y homologous clusters of species. The first group I methanotroph clust
er included the carotenoid-containing species Methylomonas methanica,
Methylomonas fodinarum, and Methylomonas aurantiaca. These species rep
resent the true members of the genus Methylomonas. The second group I
methanotroph cluster was made up of two subclusters of strains. One su
bcluster included species not capable of producing resting cells and c
onsisted of the species ''Methylomonas agile,'' ''Methylomonas alba,''
and Methylomonas pelagica. The other subcluster included species capa
ble of forming desiccation-resistant cysts and included Methylococcus
luteus, marine Methylomonas-like strains, and Methylococcus whittenbur
yi. Strains designated ''Methylococcus ucrainicus'' and Methylococcus
vinelandii were found to be synonyms of Methylococcus whittenburyi, wh
ile Methylococcus bovis was a synonym of Methylococcus luteus. It is p
roposed that these subclusters represent a new genus, Methylobacter ge
n. nov. The species in the new genus are type species Methylobacter lu
teus comb. nov., Methylobacter agilis sp. nov., Methylobacter albus sp
. nov., nom. rev., Methylobacter marinus sp. nov., Methylobacter pelag
icus comb. nov., and Methylobacter whittenburyi comb. nov. The remaini
ng group I methanotrophs included the moderately thermophilic species
Methylococcus capsulatus and Methylococcus thermophilus and a group of
unnamed strains closely related to Methylococcus capsulatus. It is pr
oposed that these species represent the true members of the genus Meth
ylococcus. The group II methanotrophs consisted of two closely related
groups. The first group included budding, exospore-producing strains,
while the second group included nonmotile, cyst-forming strains. Thes
e groups represent the genera Methylosinus and Methyocystis, which are
revived here. The genus Methylosinus gen. nov., nom. rev. includes th
e species Methylosinus trichosporium sp. nov., nom. rev. and Methylosi
nus sporium sp. nov., nom. rev., while the genus Methylocystis gen. no
v., nom. rev. includes the species Methylocystis parvus sp. nov., nom.
rev. and Methylocystis echinoides sp. nov., nom. rev.