We attempted to identify motifs of simple repetitive sequences in the
soybean genome by Southern hybridization with digoxigenin-labeled olig
onucleotide probes and chemiluminescent detection methods. Signals wer
e detected with all the fourteen probes used. The organization and abu
ndance of the tested sequence motifs varied considerably. Among the pr
obes investigated, (CT)8, (GAA)5 and (GTG)5 produced strong smear sign
als over a wide range of molecular weights. These sequence motifs coul
d be used to isolate informative locus-specific markers for linkage ma
pping. The clearest banding patterns were obtained by using (AAT)6 as
a probe, and this may be applied to fingerprinting and genome scanning
.