A 0.6-kb segment of exon 1 of the canine androgen receptor gene contai
ns two polymorphic CAG tandem repeats which encode strings of glutamin
e homopolymers. The number of CAGs in each tandem repeat was determine
d by (1) polymerase chain reaction (PCR) amplification of a gene segme
nt containing both repeats, (2) cleavage between repeats with restrict
ion enzyme EcoO109I and (3) fractionation of the restriction fragments
containing individual CAG repeats by denaturing polyacrylamide gel el
ectrophoresis (PAGE). Individual genomic DNA samples from 80 unrelated
dogs (53 males plus 27 females for a total of 107 X chromosomes) cont
ained 10-12 CAGs in the 5' repeats and 10-13 CAGs in the 3' repeats. T
hirteen distinct androgen receptor genotypes were identified. Eleven (
or 41%) of the 27 unrelated females were heterozygous in one or both r
epeat regions, whereas all male samples produced single bands as expec
ted for X chromosome markers. A total of seven distinct haplotypes con
tributed to the 13 genotypes. The 'polymorphism information content' o
r 'PIC' for this seven-allele X chromosome marker was 0.67.