The magnesium ion in bovine heart cytochrome c oxidase can be depleted
up to 75% by heat treatment of the enzyme at 43-degrees-C followed by
dialysis against EDTA buffer solution. The magnesium-depleted enzyme
so obtained retains 40% of the activity of the native enzyme. This is
the first attempt to deplete magnesium ion from bovine heart cytochrom
e c oxidase without denaturation of the protein. Magnesium depletion e
xposes at least one carboxyl group on subunit IV for labeling by ycloh
exyl-N'-(4-dimethylaminonaphthyl)carbodiimide (NCD-4). The NCD-4 label
ing of subunit IV of the magnesium-depleted enzyme is significantly en
hanced relative to what is observed for the native and heat-treated ox
idase, suggesting that the magnesium ion is located in subunit IV with
at least one carboxyl ligand. By comparing the activity of the magnes
ium-depleted enzyme with that of a control sample of heat-treated oxid
ase, the influence of divalent magnesium on the activity of the enzyme
is assessed.