Fx. Gomisruth et al., 1ST STRUCTURE OF A SNAKE-VENOM METALLOPROTEINASE - A PROTOTYPE FOR MATRIX METALLOPROTEINASES COLLAGENASES, EMBO journal, 12(11), 1993, pp. 4151-4157
Adamalysin II, a 24 kDa zinc endopeptidase from the snake venom of Cro
talus adamanteus, is a member of a large family of metalloproteinases
isolated as small proteinases or proteolytic domains of mosaic haemorr
hagic proteins from various snake venoms. Homologous domains have rece
ntly been detected in multimodular mammalian reproductive tract protei
ns. The 2.0 angstrom crystal structure of adamalysin II reveals an ell
ipsoidal molecule with a shallow active-site cleft separating a relati
vely irregularly folded subdomain from the calcium-binding main molecu
lar body composed of a five-stranded beta-sheet and four alpha-helices
. The folding of the peptide fragment containing the zinc-binding moti
f HExxHxxGxxH bears only a distant resemblance to thermolysin, but is
identical to that found in astacin, with the three histidines and a wa
ter molecule (linked to the glutamic acid) likewise constituting the z
inc ligand; adamalysin II lacks a fifth (tyrosine) zinc ligand, howeve
r, leaving its zinc ion tetrahedrally co-ordinated. Furthermore, adama
lysin II and astacin share an identical active-site basement formed by
a common Met-turn. Due to their virtually identical active-site envir
onment and similar folding topology, the snake venom metalloproteinase
s (hitherto called adamalysins) and the astacins (and presumably also
the matrix metalloproteinases/mammalian collagenases and the Serratia
proteinase-like large bacterial proteinases) might be grouped into a c
ommon superfamily with distinct differences from the thermolysin famil
y.