INTRAMOLECULAR DYNAMICS IN THE ENVIRONMENT OF THE SINGLE TRYPTOPHAN RESIDUE IN STAPHYLOCOCCAL NUCLEASE

Citation
Ap. Demchenko et al., INTRAMOLECULAR DYNAMICS IN THE ENVIRONMENT OF THE SINGLE TRYPTOPHAN RESIDUE IN STAPHYLOCOCCAL NUCLEASE, Biophysical chemistry, 48(1), 1993, pp. 39-48
Citations number
43
Categorie Soggetti
Biophysics,Biology,"Chemistry Physical
Journal title
ISSN journal
03014622
Volume
48
Issue
1
Year of publication
1993
Pages
39 - 48
Database
ISI
SICI code
0301-4622(1993)48:1<39:IDITEO>2.0.ZU;2-N
Abstract
The dipole relaxational dynamics in the environment of a single trypto phan residue Trp-140 in staphylococcal nuclease was studied by time-re solved (multi-frequency phase-modulation) spectroscopy and selective r ed-edge excitation. The long-wavelength position of the fluorescence s pectrum (at 343 nm) and the absence of red-edge excitation effects at 0 and 20 degrees C indicate that this residue is surrounded by very mo bile protein groups which relax on the subnanosecond time scale. For t hese temperatures (0-20 degrees C) the steady-state emission spectra d id not show the excitation-wavelength dependent shifts (red-edge effec ts) for excitation wavelengths from 295 to 308 nm; however, the anisot ropy decay rate is slow (tens of nanoseconds). This suggests that the spectral relaxation is due to mobility of the surrounding groups rathe r than :he motion of the tryptophan itself. The motions of the tryptop han surrounding are substantially retarded at reduced temperatures in viscous solvent (60% glycerol). The temperature dependence of the diff erence in position of fluorescence spectra at excitation wavelengths 2 95 and 305 nm demonstrate the existence of red-edge effect at sub-zero temperatures, reaching a maximum value at - 50 degrees C, where the s teady-state emission spectrum is shifted to 332 nm. The excitation and emission wavelength dependence of multi-frequency phase-modulation da ta at the half-transition point (-40 degrees C) demonstrates the exist ence of the nanosecond dipolar relaxations. At - 40 degrees C the time -dependent spectral shift is close to monoexponential with the relaxat ion time of 1.4 ns.