Antisense RNA has been used for some time as a versatile tool for sile
ncing gene expression. There is ample evidence for gene regulation by
endogenous antisense transcripts in prokaryotes and increasing insight
into the molecular mechanisms underlying such regulation. The introdu
ction of antisense gene constructs into eukaryotes has now become rout
ine but the mechanisms by which gene expression is inhibited are barel
y understood. In recent years, several examples of endogenous eukaryot
ic antisense transcripts have been discovered, some of which probably
serve regulatory functions. Here we will discuss a model to explain me
chanisms of antisense-mediated gene silencing.