DNA polymerase alpha is the only enzyme in eukaryotic cells capable of
starting DNA chains de novo and is required for the initiation of SV4
0 DNA replication in vitro. We have cloned the 70 kDa subunit of human
DNA polymerase alpha (hereafter referred to as the B subunit) and exp
ressed it as a fusion protein in bacteria: The purified fusion protein
forms a stable complex with SV40 T antigen, both in solution and when
T antigen is bound to the SV40 origin of DNA replication. Analysis of
mutant forms of the B subunit indicates that the N-terminal 240 amino
acids are sufficient to mediate complex formation. The B subunit fusi
on protein promotes formation of a complex containing T antigen and th
e catalytic subunit (subunit A) of DNA polymerase alpha, suggesting th
at it serves to tether the two proteins. These physical interactions a
re functionally significant, since the ability of T antigen to stimula
te the activity of the catalytic subunit of DNA polymerase alpha is hi
ghly dependent upon the B subunit. We suggest that the interactions me
diated by the B subunit play an important role in SV40 DNA replication
by promoting DNA chain initiation at the origin and/or facilitating t
he subsequent priming and synthesis of DNA chains on the lagging stran
d template. The protein may play similar roles in cellular DNA replica
tion.