AMPLIFIED FRAGMENT LENGTH POLYMORPHISMS OF MELOIDOGYNE SPP USING OLIGONUCLEOTIDE PRIMERS

Citation
Bg. Xue et al., AMPLIFIED FRAGMENT LENGTH POLYMORPHISMS OF MELOIDOGYNE SPP USING OLIGONUCLEOTIDE PRIMERS, Fundamental and applied nematology, 16(6), 1993, pp. 481-487
Citations number
NO
Categorie Soggetti
Zoology
ISSN journal
11645571
Volume
16
Issue
6
Year of publication
1993
Pages
481 - 487
Database
ISI
SICI code
1164-5571(1993)16:6<481:AFLPOM>2.0.ZU;2-3
Abstract
The polymerase chain reaction (PCR) method was applied to determine th e identity and infraspecific forms of the root-knot nematodes Meloidog yne arenaria, M. hapla, M. incognita and M. javanica. Amplified fragme nt length polymorphisms (AFLP) from primers Cyto 1, Cyto 2, Rpmc 62 an d Rpmt 63 showed that the Meloidogyne populations tested had genome he terogeneity. With the Cyto 1 and Cyto 2 primers, the amplified regions at 0.54, 0.95, 1.10, and 1.20 kb were highly conserved between tested populations. The bands at 2.00 kb and 2.50 kb were species specific f or M. incognita and the bands at 1.65 kb differentiated M. hapla and M . javanica from M. incognita and M. arenaria. The band at 0.85 kb, amp lified from primer Rpmc 62 and Rpmt 63, could be a specific band for M . incognita race 4. The diversified sequences that were showed by spec ies-specific and race-specific DNA fragments could have practical appl ication as diagnostic probe sequences and in the study of phylogenetic relationships.