2',5'-Oligoadenylates (2-5A) and derivatives are noncompetitive inhibi
tors of primer/HIV-1 reverse transcriptase complex formation. The mech
anism and specificity of this inhibitory action of 2-5A and 2-5A deriv
atives have been evaluated with 2-5A molecules modified in ribosyl moi
ety, chain length, extent of 5'-phosphorylation, and 2',5'-phosphodies
ter linkage. UV covalent cross-linking of preformed complexes of p66/p
66 homodimer or p66/p51 heterodimer recombinant HIV-1 reverse transcri
ptase and the primer analog pd(T)16 allowed analysis of the initial st
ep in HIV-1 reverse transcriptase-catalyzed DNA synthesis. Utilizing t
his primer binding assay, it is demonstrated that 2-5A and 2-5A deriva
tives inhibit the binding of pd(T)16 to HIV-1 reverse transcriptase. T
his inhibition is specific for the 2',5'-internucleotide linkage in th
at the corresponding 3',5'-adenylate derivatives do not exhibit inhibi
tory activity. Enhanced inhibitory properties were observed following
modifications of the 2-5A molecule which result in an increase in hydr
ophobicity. Replacement of the D-ribosyl moiety of 2-5A with the 3'-de
oxyribosyl moiety increased the inhibition of primer/HIV-1 reverse tra
nscriptase complex formation 15-20%. 2',5'-Phosphorothioate substituti
on yielded the most effective inhibitors, with K(i)'s of 7-13 muM. In
all cases, inhibition of primer/HIV-1 reverse transcriptase complex fo
rmation showed a preference for the 5'-triphosphate moiety. Nonphospho
rylated derivatives were not inhibitory; 5'-monophosphate derivatives
exhibited little or no inhibition. The inhibition of primer binding to
HIV-1 reverse transcriptase correlated well with the inhibition of DN
A-directed DNA synthesis. Introduction of R(P) chirality into the 2',5
'-phosphodiester bond, i.e., 2',5'-p3A3alphaS, resulted in the most po
tent noncompetitive inhibitor of primer/HIV-1 reverse transcriptase co
mplex formation. This 2-5A-mediated inhibition of HIV-1 reverse transc
riptase may represent part of the anti-HIV-1 activity of interferon.