Dl. Haldeman et al., CHARACTERIZATION OF THE MICROBIOLOGY WITHIN A 21-M(3) SECTION OF ROCKFROM THE DEEP SUBSURFACE, Microbial ecology, 26(2), 1993, pp. 145-159
The distribution of aerobic chemoheterotrophic microorganisms within a
21 m3 section of deep subsurface rock was determined. Nineteen sample
s for microbiological analysis were aseptically taken by hand from the
walls of a 400 m deep subsurface tunnel after an alpine miner created
fresh rock faces 0.76, 1.52, 2.28, and 3.04 m into the tunnel wall. T
he direct counts were several orders of magnitude greater than viable
counts in all samples. One of each morphologically distinct bacterial
type from each sample was purified and analyzed for fatty acid methyl
esters (FAME) using the Microbial Identification System (MIDI). Number
s of bacterial types, diversity, and equitability of recoverable micro
bial communities were the same or similar using either morphotype or F
AME analyses as the basis for distinguishing between bacterial types.
Twenty-nine genera (Euclidean distance of less-than-or-equal-to 25) we
re found within the rock section, while 28 of the 210 bacterial types
isolated were nonculturable under the growth regime required for clust
er analysis. Most isolates clustered at the genus level with Arthrobac
ter, Gordona, and Acinetobacter. Two genera, containing 16 isolates, w
ere unmatched to known organisms within the MIDI data base and cluster
ed with other isolates at a Euclidean distance greater than 50. While
some species (Euclidean distance less-than-or-equal-to 10) were recove
red from multiple sites within the rock section, most were found at 1-
3 sites and usually without a definitive pattern of distribution.