We used the interaction trap, a yeast genetic selection for interactin
g proteins, to isolate human cyclin-dependent kinase interactor 1 (Cdi
1). In yeast, Cdi1 interacts with cyclin-dependent kinases, including
human Cdc2, Cdk2, and Cdk3, but not with Ckd4. In HeLa cells, Cdi1 is
expressed at the G1 to S transition, and the protein forms stable comp
lexes with Cdk2. Cdi1 bears weak sequence similarity to known tyrosine
and dual specificity phosphatases. In vitro, Cdi1 removes phosphate f
rom tyrosine residues in model substrates, but a mutant protein that b
ears a lesion in the putative active site cysteine does not. Overexpre
ssion of wild-type Cdi1 delays progression through the cell cycle in y
east and HeLa cells; delay is dependent on Cdi1 phosphatase activity.
These experiments identify Cdi1 as a novel type of protein phosphatase
that forms complexes with cyclin-dependent kinases.