In the course of a program devoted to the synthesis of artificial endo
nucleases, we have previously reported a series of hybrid molecules in
which a purine is linked to an intercalating drug by a polyamino chai
n. These molecules recognize and cleave selectively abasic sites in DN
A with very high efficiency. In order to get insight into the mechanis
m of recognition and cleavage, we have prepared a new series of molecu
les in which the purine is linked to an amino-acridine by an aliphatic
chain containing amido or/and amino groups. The key intermediates are
alpha-halo-omega-amino polyaza chains which may be of general use as
linkers in bioconjugate chemistry.