To study the effects of methylation damage on DNA replication in vitro
, the plasmid pSVori containing the SV40 origin of replication was rea
cted with N-methyl-N-nitrosourea and used as a substrate for SV40 T an
tigen dependent replication by HeLa cell extracts. The plasmid was met
hylated with a range of N-methyl-N-nitrosourea concentrations that int
roduced an average of 0.3-2.5 O6-methylguanine and equal amounts of 3-
methyladenine lesions per DNA molecule. When methylated plasmid was in
cubated with extract of Mex- HeLaMR cells under conditions favoring DN
A replication, an impairment of replication was observed as the accumu
lation of incompletely replicated form II plasmid molecules. These ext
racts simultaneously performed a T antigen independent, DpnI-sensitive
DNA repair synthesis that increased with increasing DNA damage. Subtr
action of this repair DNA synthesis revealed that methylation inhibite
d overall replication. At low levels of methylation (less-than-or-equa
l-to 1 O6-methylguanine and less-than-or-equal-to 1 3-methyladenine le
sion per plasmid), inhibition was transient, while more extensive dama
ge resulted in apparently irreversible inhibition of replication. Remo
val of O6-methylguanine by pretreatment of the methylated plasmid with
purified human O6-methylguanine-DNA methyltransferase restored replic
ation to almost normal levels. When the methylated plasmid was replica
ted by extracts of Mex+ HeLaS3 cells proficient in the repair of O6-me
thylguanine, a lower level of inhibition and less repair DNA synthesis
was observed. The inhibition of DNA synthesis and the stimulation of
repair DNA synthesis are thus both largely due to the presence of O6-m
ethylguanine in DNA. We suggest that the inhibition of DNA replication
by O6-methylguanine may result, in part, from the processing of this
lesion during DNA replication.