Multifrequency (2-230 MHz) phase-modulation fluorescence measurements
and site-directed mutagenesis have been employed to assign fluorescenc
e lifetimes, quantum yields, and emission maxima to the four tryptopha
ns in the enzyme ornithine transcarbamoylase from Escherichia coli (OT
Case) (Trp-125, -192, -233, and -243). OTCase displays two apparent fl
uorescence lifetimes, 7.2 and 3.2 ns. Results on specific mutants show
that Trp-233 has a lifetime of 7.1 ns, while Trp- 125, -192, and -243
have lifetimes of 4.0, 3.6, and 4.9 ns, respectively. Thus, the speci
fic conformational changes of the polypeptide segment involving Trp-23
3 may be monitored conveniently in the wild-type enzyme. On the basis
of quantum yield values, Trp-233 is calculated to contribute approxima
tely 43% of the fluorescence intensity of the enzyme, while direct mea
surements of the enzyme show that up to 65% of the total intensity is
really emitted by this tryptophan. The discrepancy may arise from ener
gy transfer from Trp-125 to Trp-233, with an efficiency of 20%. Applic
ation of the assigned tryptophan lifetimes to probe ligand-induced pro
tein conformational changes has also been demonstrated.