Structural differences between the unoccupied and ligand-occupied rat
uterine estrogen receptors (ERs) were investigated using partial prote
olysis followed by immunoblotting, affinity labeling, and gel filtrati
on chromatography. Trypsin digestion of the unoccupied ER at 4-degrees
-C resulted in retention of 70-80% of high-affinity [H-3]estradiol bin
ding. Only two fragments of the rat ER were detected after prolonged t
rypsin treatment of the unoccupied ER followed by affinity labeling wi
th [H-3]tamoxifen aziridine. One fragment represents the intact steroi
d binding domain (28 kDa), and the other fragment is about 10 kDa. The
small 10-kDa fragment of the ER detected by denaturing gel electropho
resis is shown to be held in a large oligomeric complex in solution us
ing gel filtration chromatography. This oligomeric complex probably re
presents the steroid binding domain, which has its tertiary structure
maintained predominantly by noncovalent interactions between the tryps
in-generated fragments. The estrogen, anti-estrogen, and unoccupied tr
ypsinized ERs all result in similar patterns of fragments after separa
tion by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and
detection by immunoblotting. Although no new trypsin cleavage sites we
re exposed, the sensitivity of the available trypsin sites was altered
by heating the ER and, to a lesser extent, by hormone treatment. Gel
filtration chromatography of the trypsinized estradiol- and 4-hydroxyt
amoxifen-occupied ERs demonstrates similar, diffuse peaks centered at
about the correct size for the intact steroid binding domain (28 kDa),
whereas the trypsinized unoccupied ER results in a sharp, discrete pe
ak centered at about 80 kDa. We conclude that the unoccupied steroid b
inding domain has a different conformation than either the estradiol-
or the 4-hydroxytamoxifen-occupied steroid binding domains.