Bloom syndrome and a clinically related syndrome represented by the ce
ll line 46BR have been associated with reduction in DNA ligase I activ
ity. In-these syndromes, DNA ligase I deficiency severely impairs the
development and function of the immune system. We undertook analysis o
f DNA ligase I-deficient cells to determine whether the observed immun
e deficiency is attributable to a perturbation in the process of V(D)j
recombination. V(D)J recombination in Bloom syndrome cell lines and 4
6BR was examined by a transient transfection assay. No effect on the f
idelity of coding and signal junction formation in DNA ligase I-defici
ent cells was observed. The frequency of V(D)J recombination in DNA li
gase I-deficient cells was also examined using recombination substrate
s modified to function in human cells. Similar recombination frequenci
es were observed in normal and DNA ligase I-deficient cells, demonstra
ting that the efficiency of the V(D)J recombination process is unaffec
ted by alterations in DNA ligase I activity. Rearranged immunoglobulin
loci from Bloom syndrome cell lines and patient material were molecul
arly cloned by an inverse polymerase chain reaction strategy which sho
uld be applicable to a variety of human immunodeficiency syndromes and
were indistinguishable from those found in normal bone marrow samples
. Our data argue that the immune system defects associated with DNA li
gase I deficiency do not result from perturbation of the V(D)J recombi
nation pathway.