The products of the RAG-1 and RAG-2 genes ([1], [2]) are essential for
the recombination of the DNA encoding the antigen receptors of the de
veloping immune system. Little is known of the specific role these gen
es play. We have explored the sequences encoding mouse RAG-1 by deleti
ng large parts of the gene and by introducing local sequence changes.
We find that a RAG-1 gene with 40% of the coding region deleted still
retains its recombination function. In addition, a series of small del
etions within the strongly conserved remaining 60% of the coding regio
n was tested. Nine out of ten of these prove unable to provide RAG-1 a
ctivity, but one is quite active. Certain peptide sequences were also
specifically targeted for mutagenesis. The RAG-1 protein generated fro
m this expression system is transported to the nucleus and is degraded
with a 15 minute half-life. The fate of the proteins made by the dele
tion mutants were also assessed. Transport of RAG-1 protein to the nuc
leus was found even with the most extensive deletions studied. The fun
ctionality of the deleted proteins is discussed with relation to an al
ignment of RAG-1 sequences from five animal species.