Jp. Ferris et G. Ertem, MONTMORILLONITE CATALYSIS OF RNA OLIGOMER FORMATION IN AQUEOUS-SOLUTION - A MODEL FOR THE PREBIOTIC FORMATION OF RNA, Journal of the American Chemical Society, 115(26), 1993, pp. 12270-12275
Oligomers of adenylic acid of up to the 11-mer in length are formed by
the reaction of the phosphorimidazolide of adenosine (ImpA) in pH 8 a
queous solution at room temperature in the presence of Na+-montmorillo
nite. These oligomers are joined by phosphodiester bonds in which the
3',5'-linkage predominates over the 2',5'-linkage by a 2:1 ratio. Reac
tion of a 9:1 mixture of ImpA, A5'ppA results in the formation of olig
omers with a 3:1 ratio of 3',5'- to 2',5'-linked phosphodiester bonds.
A high proportion of these oligomers contain the A5'ppA grouping. A5'
ppA reacts much more rapidly with ImpA than does 5'-ADP (ppA) or 5'-AT
P (pppA). The exchangeable cation associated with the montmorillonite
effects the observed catalysis with Li+, Na+, NH4+, and Ca2+ being the
more effective while Mg2+ and Al3+ are almost ineffective catalysts.
2',5'-Linked oligomers, up to the tetramer in length, are formed using
UO22+-montmorillonite. The structure analysis of individual oligomer
fractions was performed by selective enzymatic and KOH hydrolytic stud
ies followed by HPLC analysis of the reaction products. It is conclude
d from the composition of the oligomers that the rate of addition ImpA
to a 3'-terminus containing a 2',5'-linkage is slower than the additi
on to a nucleoside joined by a 3',5'-linked phosphodiester bond. The p
otential importance of mineral catalysis of the formation of RNA and o
ther oligomers on primitive Earth is discussed.