Pd. Walker et Pg. Mezey, MOLECULAR ELECTRON-DENSITY LEGO APPROACH TO MOLECULE BUILDING, Journal of the American Chemical Society, 115(26), 1993, pp. 12423-12430
A new method is presented for the construction of ab initio quality ap
proximate electronic charge distributions for large molecules from cha
rge distributions of small molecular fragments. This method is reminis
cent to building structures using Lego blocks. The electronic density
distribution calculated using the method is quantitatively shown to be
very similar to that calculated for entire molecules using convention
al ab initio packages with standard basis sets such as 6-31G*, while
requiring only a fraction of the computational time. The pre-calculate
d fuzzy electron distributions of base molecular fragments, stored in
a data bank, are merged (rotated, translated, and subsequently added t
ogether) to calculate these approximate charge distributions for the m
olecule. The method requires only the Cartesian coordinates of the nuc
lei for the construction of molecular charge distributions. The speed
of the method makes it potentially useful for molecular modeling appli
cations where construction of electron densities of large molecules is
especially important. The technique can be used to replace fused sphe
re models of large molecules with more realistic electron density cont
ours. One additional advantage is that these contours can be displayed
for a whole range of density values, from tight, high-density contour
s, representing the bonding pattern, to loose, low-density contours re
presenting the peripheral shape and size features of molecules.