M. Starink et al., QUANTITATIVE CENTRIFUGATION TO EXTRACT BENTHIC PROTOZOA FROM FRESH-WATER SEDIMENTS, Applied and environmental microbiology, 60(1), 1994, pp. 167-173
Two methods for extracting protists from freshwater sediment are descr
ibed: (i) an adapted isopycnic centrifugation technique for sandy and
gyttja-like sediments and (ii) a rate zonal centrifugation technique f
or sediments rich in particulate organic material (litter-like sedimen
ts). The recoveries of protists during isopycnic centrifugation in med
ia of several densities were compared. No significant losses in sodium
diatrizoate and Percoll were recorded. After known amounts of nanofla
gellates were added to azoic sediments, the protists were extracted an
d counted. For sandy sediments, we found 100% recovery, and for the gy
ttja-like sediments we found a maximum recovery of 94%. The recovery o
f protozoa extracted from litter-like sediments, characteristic of lit
toral systems, depends on a given centrifugal force, on time, and on t
he dimensions of the flagellates. A recovery model which takes into ac
count cell dimensions and centrifugation characteristics gives the min
imum expected recovery.