We previously reported the presence of a new gene (HSET) with an unkno
wn function, in the centromeric side of the class II gene region of th
e human major histocompatibility complex (MHC). cDNA clones correspond
ing to the HSET gene were isolated from a human testis cDNA library. A
2.4 kilobase transcript from the HSET gene was abundantly expressed i
n testis, B-cell, T-cell, and ovary cell lines but was not detected in
lung or stomach. Analysis of the nucleotide sequence of the HSET cDNA
clones revealed significant similarity to kinesin-related proteins in
yeast, Drosophila, and human. Its predicted amino acid sequence conta
ins a domain with strong sequence similarity to the ATP-binding and mo
tor domains of a plus end-directed microtuble motor protein, kinesin,
which might be involved in mitotic chromosome segregation, suggesting
that the HSET gene encodes a novel kinesin-related protein.