Collagenase is a zinc-dependent endoproteinase and is a member of the
matrix metalloproteinase (MMP) family of enzymes. The MMPs participate
in connective tissue remodeling events and aberrant regulation has be
en associated with several pathologies. The 2.4 angstrom resolution st
ructure of the inhibited enzyme revealed that, in addition to the cata
lytic zinc, there is a second zinc ion and a calcium ion which play a
major role in stabilizing the tertiary structure of collagenase. Despi
te scant sequence homology, collagenase shares structural homology wit
h two other endoproteinases, bacterial thermolysin and crayfish astaci
n. The detailed description of protein-inhibitor interactions present
in the structure will aid in the design of compounds that selectively
inhibit individual members of the MMP family. Such inhibitors will be
useful in examining the function of MMPs in pathological processes.