W. Form et al., VECTORIZED AND PARALLELIZED ALGORITHMS FOR MULTIMILLION PARTICLE MD-SIMULATION, International journal of modern physics C, 4(6), 1993, pp. 1085-1101
We present fully vectorized and parallelized algorithms for the molecu
lar dynamics simulation of particle systems with short-range interacti
on. Speed of million particle updates per second are achieved with mod
ern vector and parallel computers, thus making the simulation of milli
on particle systems possible. We present results for the Cray YMP, JAE
RI/NEC MONTE-4 vector computers and the Intel Paragon XP/S and Thinkin
g Machine CM-5 parallel computers.