OMEGA - A 3-DIMENSIONAL DATA-BANK FOR PROTEIN STRUCTURES (A COMPLEMENT TO PDB)

Citation
Mt. Semertzidis et al., OMEGA - A 3-DIMENSIONAL DATA-BANK FOR PROTEIN STRUCTURES (A COMPLEMENT TO PDB), Computer applications in the biosciences, 9(6), 1993, pp. 667-670
Citations number
12
Categorie Soggetti
Mathematical Methods, Biology & Medicine","Computer Sciences, Special Topics","Computer Science Interdisciplinary Applications","Biology Miscellaneous
ISSN journal
02667061
Volume
9
Issue
6
Year of publication
1993
Pages
667 - 670
Database
ISI
SICI code
0266-7061(1993)9:6<667:O-A3DF>2.0.ZU;2-O
Abstract
OMEGA is a compilation of recent structural information on proteins de rived from X-ray crystallography or NMR and published in journals refe renced by Current Contents. To date, 401 entries have been included (3 34 X-ray, 28 MMR, 5 NMR + X-ray, 5 electron microscopy, 3 neutron scat tering, 2 neutron diffraction, 1 electron microscopy + X-ray, 12 model , 11 miscellaneous), with 5-10 new proteins being added each week. OME GA can be accessed on Macintosh and is interrogated through 32 key wor ds (space group, resolution, secondary structure, number of residues, etc). This pool of proteins could be used for various purposes, includ ing searches for proteins with a particular set of secondary structure s. OMEGA will be continuously updated (every 6 months) and may later i nclude all proteins already reported in the PDB, as well as structures reported in journals with smaller readerships.