CEDIT - A C-INTERFACE AND MACRO FACILITY FOR PROTEIN-SEQUENCE ALIGNMENT EDITING IN COLOR WITH MICROSOFT-WORD-5.0 FOR PCS

Citation
Mo. Ortells et al., CEDIT - A C-INTERFACE AND MACRO FACILITY FOR PROTEIN-SEQUENCE ALIGNMENT EDITING IN COLOR WITH MICROSOFT-WORD-5.0 FOR PCS, Computer applications in the biosciences, 9(6), 1993, pp. 741-744
Citations number
8
Categorie Soggetti
Mathematical Methods, Biology & Medicine","Computer Sciences, Special Topics","Computer Science Interdisciplinary Applications","Biology Miscellaneous
ISSN journal
02667061
Volume
9
Issue
6
Year of publication
1993
Pages
741 - 744
Database
ISI
SICI code
0266-7061(1993)9:6<741:C-ACAM>2.0.ZU;2-2
Abstract
CEDIT, a C interface and macro facility that provides for the colour e diting of protein sequence alignments (up to 2000 sequences, 5000 resi dues each) using Microsoft Ward 5.0 for PCs is presented. CEDIT uses t he ability of MS-Word 5.0 to display letters with the desired colour t o easily identify conservative homologies across the sequences. A glos sary file with useful macros for the sequence editing is provided, alo ng with several utilities programs for error checking, estimating sequ ence similarities and homology significance. CEDIT has a menu interfac e and a context sensitive help.