ROLE OF TYROSINE-143 IN LACTATE DEHYDROGENATION BY FLAVOCYTOCHROME-B(2) - PRIMARY KINETIC ISOTOPE EFFECT STUDIES WITH A PHENYLALANINE MUTANT

Citation
N. Rouvierefourmy et al., ROLE OF TYROSINE-143 IN LACTATE DEHYDROGENATION BY FLAVOCYTOCHROME-B(2) - PRIMARY KINETIC ISOTOPE EFFECT STUDIES WITH A PHENYLALANINE MUTANT, Biochemistry, 33(3), 1994, pp. 798-806
Citations number
61
Categorie Soggetti
Biology
Journal title
ISSN journal
00062960
Volume
33
Issue
3
Year of publication
1994
Pages
798 - 806
Database
ISI
SICI code
0006-2960(1994)33:3<798:ROTILD>2.0.ZU;2-#
Abstract
Flavocytochrome b2 catalyzes the oxidation of lactate at the expense o f cytochrome c. After flavin (FMN) reduction by the substrate, reducin g equivalents are transferred one by one to heme b2, and from there on to cytochrome c. The crystal structure of the enzyme is known at 2.4- angstrom resolution, and specific roles in catalysis have been assigne d to active side chains. Tyr143 in particular, located at the interfac e between the flavodehydrogenase moiety and the heme-binding domain, w as thought to take part in substrate binding, as well as to orient the heme-binding domain for efficient electron transfer. A first study of the properties of a Tyr143Phe mutant showed that the major effect of the mutation was to decrease the rate of electron transfer from flavin to heme [Miles, C. S., Rouviere-Fourmy, N., Lederer, F., Mathews, F. S., Reid, G. A., Black, M. T., & Chapman, S. K. (1992) Biochem. J. 285 , 187-192]. In the present paper, we focus on the effect of the mutati on on catalysis of lactate dehydrogenation. We report the deuterium ki netic isotope effects on flavin reduction as measured with stopped-flo w methods and on cytochrome c reduction in the steady-state using L-[2 -H-2]lactate. For the wild-type enzyme, isotope effects on FMN reducti on, D(k(red)F) and D(k(red)F)/K(m)), were 7.2 +/- 0.9 and 4.2 +/- 1.3, respectively, and for the Y143F mutant values of 4.4 +/- 0.5 and 3.9 +/- 1.1 were obtained. Calculations, from deuterium isotope effects, o f substrate K(d) values, combined with knowledge of k(cat)/K(m) values , lead to the conclusion that Tyr143 does stabilize the Michaelis comp lex by hydrogen bonding to a substrate carboxylate, as was postulated; but the mutation does not destabilize the transition state more than the Michael is complex. lt is concluded that Tyr143 does not play the role of an acid or an electrophilic catalyst which would stabilize the carbanion-like transition state formed in the initial step of the rea ction. Tritium isotope effects were also determined using DL-[2-H-3]la ctate and yielded (T)V/K figures of 15.8 +/- 1.7 and 11.3 +/- 0.5 for the wild-type and the Y143F mutant. Analysis of the results supports t he idea that the (D)V effects determined for FMN reduction are intrins ic isotope effects values and therefore that the mutalion induces a ch ange in the structure of the transition state.