Diel variations in the optical properties of the marine diatom Thalass
iosira pseudonana were examined in a nutrient-replete laboratory cultu
re exposed to a day-night cycle in natural irradiance which simulated
the light regime in upper layers of the euphotic zone (approximately 1
0 m). Measurements of the beam attenuation coefficient, absorption coe
fficient, and size distribution of cells in suspension were used to de
termine optical cross-sections and refractive index of cells. The opti
cal cross-sections varied greatly over a diel cycle; the absorption cr
oss-section (sigma(a)BAR) increased by as much as 35% and the attenuat
ion (sigma(c)BAR) and scattering (sigma(b)BAR) cross-sections by 80% b
etween minima near sunrise and maxima near sunset. These changes were
associated with significant variations in refractive index and cell si
ze. Diel changes in the imaginary part of the refractive index (n'), d
riven by variation in intracellular pigment concentration, accounted f
or 58-72% of the difference between the daily maxima and minima in sig
ma(a)BAR. Variations in the real part of the refractive index (n) cont
ributed substantially (up to 85%) to the daily range in sigma(c)BAR, a
nd sigma(b)BAR. Increases in cell size were important during the morni
ng, increasing the attenuation cross-section to a similar extent as th
e refractive index. Variability in n correlated strongly with changes
in intracellular C concentration. The normalization of attenuation and
scattering cross-sections to cellular C content resulted in a threefo
ld reduction in the magnitude of diel variations. If such patterns are
general features of planktonic microorganisms in the natural environm
ent, it would suggest that varying particle concentration need not be
the only (or even major) factor responsible for diel variability in th
e bulk optical properties of seawater. As a consequence, estimating pa
rticle production rates from diel variability in the beam attenuation
coefficient may not be justified in some oceanic situations; however,
using this variability to estimate production in terms of particulate
organic C may be appropriate.