IDENTIFICATION, CHARACTERIZATION, AND ANALYSIS OF CDNA AND GENOMIC SEQUENCES ENCODING 2 DIFFERENT SMALL HEAT-SHOCK PROTEINS IN HORDEUM-VULGARE

Citation
N. Marmiroli et al., IDENTIFICATION, CHARACTERIZATION, AND ANALYSIS OF CDNA AND GENOMIC SEQUENCES ENCODING 2 DIFFERENT SMALL HEAT-SHOCK PROTEINS IN HORDEUM-VULGARE, Genome, 36(6), 1993, pp. 1111-1118
Citations number
39
Categorie Soggetti
Genetics & Heredity
Journal title
GenomeACNP
ISSN journal
08312796
Volume
36
Issue
6
Year of publication
1993
Pages
1111 - 1118
Database
ISI
SICI code
0831-2796(1993)36:6<1111:ICAAOC>2.0.ZU;2-B
Abstract
In vitro translation of mRNAs prepared from barley (Hordeum vulgare) s eedlings (cv. Onice) exposed at 40 degrees C directed the synthesis of major heat shock proteins (HSPs) with molecular masses of 80-90, 70, 42 and 16-22 kDa. A cDNA library prepared from the 40 degrees C mRNAs and screened by differential hybridization led to the isolation of hea t shock specific sequences. One of these (Hv hsp18) was confirmed by h ybrid-arrested and hybrid-released translation as encoding for an 18-k Da HSP. The barley hsp18 sequence has an open reading frame encoding a 160 amino acid residue 18-kDa protein that is 63% identical to wheat 16.9-kDa HSP (clone C5-8), 54% identical to soybean (Glycine max) 17.5 -kDa HSP, and 49% identical to Arabidopsis thaliana 17.6-kDa HSP Lower similarities were found with class II plant small HSPs such as soybea n 17.9-kDa HSP (27%), Pisum sativum 17.7-kDa HSP (30%), wheat (Triticu m aestivum) 17.3-kDa HSP (clone Ta hsp 17.3) (30%), and with animal sm all HSPs and alpha-crystallins. The Hv hsp18 sequence was used to pick up Hv hsp17 genomic sequence encoding for another class I 17-kDa HSP By computer analysis of the nucleotide sequence the TATA box, two heat shock promoter elements, a metal-ion response element, and the polyad enylation signals were identified. Barley HSP18 has an additional cyst eine-rich region when compared with HSP17 mapping at the carboxy termi nal end.