RANDOM AMPLIFIED POLYMORPHIC DNA (RAPD) MARKER VARIABILITY BETWEEN AND WITHIN GENE POOLS OF COMMON BEAN

Citation
Sd. Haley et al., RANDOM AMPLIFIED POLYMORPHIC DNA (RAPD) MARKER VARIABILITY BETWEEN AND WITHIN GENE POOLS OF COMMON BEAN, Journal of the American Society for Horticultural Science, 119(1), 1994, pp. 122-125
Citations number
32
Categorie Soggetti
Horticulture
ISSN journal
00031062
Volume
119
Issue
1
Year of publication
1994
Pages
122 - 125
Database
ISI
SICI code
0003-1062(1994)119:1<122:RAPD(M>2.0.ZU;2-L
Abstract
The objective of this study was to evaluate the degree of RAPD marker variability between and within commercially productive market classes representative of the Andean and Middle American gene pools of common bean (Phaseolus vulgaris L.). Six sets of near-isogenic lines were scr eened with oligonucleotide primers in the polymerase chain reaction-ba sed RAPD assay. Simultaneous analyses with at least three sets of line s enabled us to score RAPD markers between the two major gene pools, r aces within the same gene pool, and different genotypes of the same ra ce (within race). A ''three-tiered'' pattern of polymorphism was obser ved: between gene pools > between races > within races. The overall le vel of polymorphism between the Andean and Middle American gene pools was 83.4 %. The overall level of polymorphism between races within the same gene pool was similar for Andean races (60.4%) and Middle Americ an races (61.7%). The level of polymorphism between related commercial navy bean tines was 39.2% and between related commercial snap bean li nes was 53.6%. The inherent simplicity and efficiency of RAPD analyses , coupled with the number of polymorphisms detectable between related commercial genotypes, should facilitate the construction of RAPD-based genetic linkage maps in the context of populations representative of most bean breeding programs.