One monomeric and three oligomeric potato spindle tuber viroid (PSTVd)
cDNA units were introduced into the tobacco genome via the Agrobacter
ium-mediated leaf-disc transformation. Southern analysis of the integr
ates revealed that only their PSTVd-specific sequences become fully me
thylated, whereas the flanking T-DNA and the genomic plant DNA remain
unaltered. Viroid cDNA methylation could only be observed after autono
mous viroid RNA-RNA replication had taken place in these plants. These
findings demonstrate that a mechanism of de novo methylation of genes
might exist that can be induced and targeted in a sequence-specific m
anner by their own mRNA.