H. Oyaizu et al., DISTRIBUTION OF RHIZOBIA IN LEGUMINOUS PLANTS SURVEYED BY PHYLOGENETIC IDENTIFICATION, Journal of General and Applied Microbiology, 39(4), 1993, pp. 339-354
The distribution of rhizobia, bacteria which nodulate roots of legumin
ous plants, was surveyed for 91 species of the family Leguminoceae. On
e hundred and twenty-one strains of rhizobia were isolated, and 29 str
ains were obtained from culture collections. The total of 150 strains
were classified based on their small subunit (ssu) ribosomal RNA (rRNA
) sequences. The analyses of the partial sequences (157 bases from pos
itions 1220 to 1377 in Escherichia coli numbering system) revealed the
presence of three major groups which corresponded with the genera Rhi
zobium, Bradyrhizobium, and Azorhizobium and the presence of 17 variet
ies (eight varieties for the genus Rhizobium, eight for the genus Brad
yrhizobium, and one for the genus Azorhizobium). Several phenotypic ch
aracteristics and DNA base compositions were determined for 27 represe
ntative strains from 17 varieties. Also, genomic relatedness among the
27 strains was estimated by DNA-DNA hybridization. The strains which
were different in their ssu rRNA partial sequences never showed close
relationships in DNA-DNA hybridization. Further, sequences covering mo
st of ssu rRNA were compared among 17 representative strains of the 17
varieties including type strains of seven Rhizobium species, Bradyrhi
zobium japonicum and Azorhizobium caulinodans, and phylogenetic relati
onships among rhizobia were discussed. From phylogenetic analyses it i
s inferred that the nodulation genes transferred among rhizobia.