The general objective is to provide an alternative methodology based o
n capillary electrophoresis (CE) to characterize flavonoids from honey
and hence determine its botanical origin. The specific objective is t
o compare the separation of flavonoids by CE with those achieved by HP
LC to assess CE as an alternative technique for the determination of h
oney flavonoids. Fourteen different flavonoids isolated from honey wer
e analysed by MECC and compared to the HPLC separations. It was diffic
ult to find specific experimental conditions to separate all the flavo
noids from honey in a single MEKC run. Three chromatographic condition
s are optimized and, depending on the flavonoid markers sought in hone
y, the appropriate detection method should be chosen. Compared to the
HPLC results, it is clear that CE could be an alternative technique in
honey flavonoids analysis and particularly in the study of its geogra
phical and floral origin.