Mr. Wilson et al., REPLICATED DATA AND DOMAIN DECOMPOSITION MOLECULAR-DYNAMICS TECHNIQUES FOR SIMULATION OF ANISOTROPIC POTENTIALS, Journal of computational chemistry, 18(4), 1997, pp. 478-488
The implementation of parallel molecular dynamics techniques is discus
sed in the context of the simulation of single-site anisotropic potent
ials. We describe the use of both replicated data and domain decomposi
tion approaches to molecular dynamics and present results for systems
of up to 65536 Gay-Berne molecules on a range of parallel computers (T
ranstech i860/XP Paramid, Intel iPSC/860 Hypercube, Gray T3D). We find
that excellent parallel speed-ups are possible for both techniques, w
ith the domain decomposition method found to be the most efficient for
the largest systems studied. (C) 1997 by John Wiley & Sons, Inc.