V. Gopalakrishnan et S. Benkovic, EFFECT OF A THIOBENZIMIDAZOLONE DERIVATIVE ON DNA STRAND TRANSFER CATALYZED BY HIV-1 REVERSE-TRANSCRIPTASE, The Journal of biological chemistry, 269(6), 1994, pp. 4110-4115
Thiobenzimidazolone (TIBO) derivatives are known inhibitors of the DNA
polymerase activity of human immunodeficiency virus type 1 (HIV-1) re
verse transcriptase (RT). The effect of a TIBO derivative yl)-imidazol
[4,5,1-jk]1,4-benzodiazapine-2-thione) DNA strand transfer reaction ca
talyzed by HIV-1 RT (which is a function of both the DNA polymerase an
d RNase H activities) was investigated by delineating the effect of th
e drug on the constitutive DNA polymerase and RNase H activities. Sing
le nucleotide incorporation on template-primer 1 was used to study the
DNA polymerase activity of HIV-1 RT while template-primer 2 was used
to study the effect of TIBO on the RNase H activity (polymerase indepe
ndent). The drug was found to decrease the amplitude of the presteady-
state burst when preequilibrated with the enzyme substrate complex bes
ides decreasing the steady-state rate of single nucleotide incorporati
ons. In the absence of preincubation, TIBO did not affect the burst am
plitude but decreased the steady-state rate after the pre-transient ph
ase. This suggested that binding of TIBO to RT was affected by the pre
sence of template-primer and required dissociation of the enzyme from
the template primer for effective binding. The polymerase-independent
RNase H activity was activated in the presence of TIBO. The effect of
TIBO on the overall process of DNA strand transfer is a balance betwee
n its inhibition of the polymerase activity and its activation of the
RNase H activity.