H. Takei et al., ACTIVE-SITE LYSINE BACKBONE UNDERGOES CONFORMATIONAL-CHANGES IN THE BACTERIORHODOPSIN PHOTOCYCLE, The Journal of biological chemistry, 269(10), 1994, pp. 7387-7389
Results are presented demonstrating that the backbone of the active si
te lysine of bacteriorhodopsin undergoes light-induced structural alte
rations during bacteriorhodopsin-mediated light-induced proton pumping
. This conclusion is based on difference Fourier transform infrared sp
ectroscopy of isotopically labeled bacteriorhodopsin. The data demonst
rate that the backbone carbonyl of lysine achieves an extremely low vi
brational frequency during M(412) intermediate formation. This is prec
eded by a structural transition in the lysine backbone that leads to a
n active site lysine carbonyl with the observed low vibrational freque
ncy, probably due to a high degree of solvation.