Dm. Schifferli et Ma. Alrutz, PERMISSIVE LINKER INSERTION SITES IN THE OUTER-MEMBRANE PROTEIN OF 987P FIMBRIAE OF ESCHERICHIA-COLI, Journal of bacteriology, 176(4), 1994, pp. 1099-1110
The FasD protein is essential for the biogenesis of 987P fimbriae of E
scherichia coli. In this study, subcellular fractionation was used to
demonstrate that FasD is an outer membrane protein. In addition, the a
ccessibility of FasD to proteases established the presence of surface-
exposed FasD domains on both sides of the outer membrane. The fasD gen
e was sequenced, and the deduced amino acid sequence was shown to shar
e homologous domains with a family of outer membrane proteins from var
ious fimbrial systems. Similar to porins, fimbrial outer membrane prot
eins are relatively polar, lack typical hydrophobic membrane-spanning
domains, and possess secondary structures predicted to be rich in turn
s and amphipathic beta-sheets. On the basis of the experimental data a
nd structural predictions, FasD is postulated to consist essentially o
f surface-exposed turns and loops and membrane-spanning interacting am
phipathic beta-strands. In an attempt to test this prediction, the fas
D gene was submitted to random in-frame linker insertion mutagenesis.
Preliminary experiments demonstrated that it was possible to produce f
asD mutants, whose products remain functional for fimbrial export and
assembly. Subsequently, 11 fasD alleles, containing linker inserts enc
oding beta-turn-inducing residues, were shown to express functional pr
oteins. The insertion sites were designated permissive sites. The inse
rts used are expected to be least detrimental to the function of FasD
when they are inserted into surface-exposed domains not directly invol
ved in fimbrial export. In contrast, FasD is not expected to accommoda
te such residues in its amphipathic P-strands without being destabiliz
ed in the membrane and losing function. All permissive sites were sequ
enced and shown to be located in or one residue away from predicted tu
rns. In contrast, 5 of 10 sequenced nonpermissive sites were mapped to
predicted amphipathic beta-strands. These results are consistent with
the structural predictions for FasD.