Plastid genes are transcribed by DNA-dependent RNA polymerase(s), whic
h have been incompletely characterized and have been examined in a lim
ited number of species. Plastid genomes contain rpoA, rpoB, rpoC1, and
rpoC2 coding for alpha, beta, beta', and beta'' RNA polymerase subuni
ts that are homologous to the alpha, beta, and beta' subunits that con
stitute the core moiety of RNA polymerase in bacteria. However, genes
with homology to sigma subunits in bacteria have not been found in pla
stid genomes. An antibody directed against the principal sigma subunit
of RNA polymerase from the cyanobacterium Anabaena sp. PCC 7120 was u
sed to probe western blots of purified chloroplast RNA polymerase from
maize, rice, Chlamydomonas reinhardtii, and Cyanidium caldarium. Chlo
roplast RNA polymerase from maize and rice contained an immunoreactive
64-kD protein. Chloroplast RNA polymerase from C. reinhardtii contain
ed immunoreactive 100- and 82-kD proteins, and chloroplast RNA polymer
ase from C. caldarium contained an immunoreactive 32-kD protein. The e
lution profile of enzyme activity of both algal chloroplast RNA polyme
rases coeluted from DEAF with the respective immunoreactive proteins,
indicating that they are components of the enzyme. These results provi
de immunological evidence for sigma-like factors in chloroplast RNA po
lymerase in higher plants and algae.