The guanine nucleotide exchange factor (GEF) is a multi-subunit protei
n which catalyzes the exchange of GDP for GTP in eukaryotic chain init
iation factor 2. Phosphorylation of the 82-kDa subunit of GEF in vitro
by casein kinase II (CK-II) is associated with a 5-fold increase in n
ucleotide exchange activity. However, phosphorylation of GEF in vivo h
as not been studied, and the kinase(s) that phosphorylate GEF have not
been identified. The 82-kDa subunit of GEF was partially sequenced, a
nd a synthetic peptide was used to generate polyclonal anti-peptide an
tibodies that react specifically with this subunit. To examine the pho
sphorylation of GEF in intact cells, the protein was isolated and puri
fied extensively from metabolically P-32-labeled rabbit reticulocytes.
Only the 82-kDa subunit was found to be phosphorylated, and on Wester
n blots the anti-peptide antisera reacted specifically with the labele
d subunit. Phosphoamino acid analysis indicated that phosphorylation o
ccurred exclusively on Ser residues. Digestion with cyanogen bromide o
f in vivo labeled protein and GEF phosphorylated in vitro by CK-II pro
duced comparable phosphopeptide maps. However, additional phosphopepti
de bands were also observed with GEF derived from intact cells. Sequen
ce analysis obtained by Edman degradation of the phosphopeptides was c
ompared with the deduced amino acid sequence of a cloned 82-kDa subuni
t of GEF [Bushman, J. L., Asuru, A. I., Matts, R. L., and Hinnenbusch,
A. G. (1993) Mol. Cell, Biol. 13, 1920-1932]. Putative sites of phosp
horylation were identified at Ser 703 and/or 704, which contain the se
quence S(P)XXD, a CK-II consensus recognition motif. In addition, the
Ser residue at position 174 could also be phosphorylated by CK-II in a
hierarchical manner. These results suggest that the 82-kDa subunit of
GEF is phosphorylated in vivo by CK-II or a similar enzyme, and this
covalent posttranslational modification is a potential mechanism for t
he regulation of GEF in eukaryotic cells.