Several aspects of the endosymbiosis of methanogenic archaea with anae
robic protozoa are reviewed. Special attention is payed to the role of
hydrogenosomes and plastid-like organelles that seem to provide the s
ubstrates for the methanogenic endosymbionts. Evidence is presented th
at hydrogenosomes evolved several times in the various protoctistan ta
xa. Hydrogenosomes are seemingly different, and their common denominat
or is the production of hydrogen. The absence of nucleic acids and a p
rotein-synthesizing machinery hampers the analysis of their divergent
evolutionary history, and molecular genetic data argue not only for di
fferent but even a chimeric origin of the hydrogenosomes.